Index

B

BatchViewSet (class in chord_metadata_service.patients.api_views) BeaconListIndividuals (class in chord_metadata_service.patients.api_views) Biosample (class in chord_metadata_service.phenopackets.models)

Biosample.DoesNotExist Biosample.MultipleObjectsReturned BiosampleBatchViewSet (class in chord_metadata_service.phenopackets.api_views) BiosampleViewSet (class in chord_metadata_service.phenopackets.api_views)

C

chord_metadata_service.chord.models (module) chord_metadata_service.experiments.api_views (module) chord_metadata_service.experiments.models (module) chord_metadata_service.patients.api_views (module) chord_metadata_service.patients.models (module) chord_metadata_service.phenopackets.api_views (module)

chord_metadata_service.phenopackets.models (module) chord_metadata_service.resources.api_views (module) chord_metadata_service.resources.models (module) clean() (chord_metadata_service.chord.models.Dataset method) (chord_metadata_service.chord.models.ProjectJsonSchema method) (chord_metadata_service.phenopackets.models.GenomicInterpretation method) (chord_metadata_service.resources.models.Resource method)

D

Dataset (class in chord_metadata_service.chord.models) Dataset.DoesNotExist Dataset.MultipleObjectsReturned Diagnosis (class in chord_metadata_service.phenopackets.models) Diagnosis.DoesNotExist Diagnosis.MultipleObjectsReturned DiagnosisViewSet (class in chord_metadata_service.phenopackets.api_views)

Disease (class in chord_metadata_service.phenopackets.models) Disease.DoesNotExist Disease.MultipleObjectsReturned DiseaseViewSet (class in chord_metadata_service.phenopackets.api_views) dispatch() (chord_metadata_service.experiments.api_views.ExperimentViewSet method) (chord_metadata_service.patients.api_views.IndividualViewSet method) (chord_metadata_service.phenopackets.api_views.PhenopacketsModelViewSet method)

E

Experiment (class in chord_metadata_service.experiments.models) Experiment.DoesNotExist Experiment.MultipleObjectsReturned ExperimentResult (class in chord_metadata_service.experiments.models)

ExperimentResult.DoesNotExist ExperimentResult.MultipleObjectsReturned ExperimentViewSet (class in chord_metadata_service.experiments.api_views) ExtendedPhenopacketsModelViewSet (class in chord_metadata_service.phenopackets.api_views)

G

Gene (class in chord_metadata_service.phenopackets.models) Gene.DoesNotExist Gene.MultipleObjectsReturned GeneViewSet (class in chord_metadata_service.phenopackets.api_views) GenomicInterpretation (class in chord_metadata_service.phenopackets.models) GenomicInterpretation.DoesNotExist GenomicInterpretation.MultipleObjectsReturned

GenomicInterpretationViewSet (class in chord_metadata_service.phenopackets.api_views) get_chord_phenopacket_schema() (in module chord_metadata_service.phenopackets.api_views) get_experiment_schema() (in module chord_metadata_service.experiments.api_views) get_project_id() (chord_metadata_service.patients.models.Individual method) (chord_metadata_service.phenopackets.models.Biosample method) (chord_metadata_service.phenopackets.models.Phenopacket method) get_queryset() (chord_metadata_service.patients.api_views.IndividualBatchViewSet method) (chord_metadata_service.phenopackets.api_views.BiosampleBatchViewSet method)

H

HtsFile (class in chord_metadata_service.phenopackets.models) HtsFile.DoesNotExist

HtsFile.MultipleObjectsReturned HtsFileViewSet (class in chord_metadata_service.phenopackets.api_views)

I

Individual (class in chord_metadata_service.patients.models) Individual.DoesNotExist Individual.MultipleObjectsReturned IndividualBatchViewSet (class in chord_metadata_service.patients.api_views) IndividualViewSet (class in chord_metadata_service.patients.api_views) Instrument (class in chord_metadata_service.experiments.models)

Instrument.DoesNotExist Instrument.MultipleObjectsReturned Interpretation (class in chord_metadata_service.phenopackets.models) Interpretation.DoesNotExist Interpretation.MultipleObjectsReturned InterpretationViewSet (class in chord_metadata_service.phenopackets.api_views)

M

MetaData (class in chord_metadata_service.phenopackets.models) MetaData.DoesNotExist

MetaData.MultipleObjectsReturned MetaDataViewSet (class in chord_metadata_service.phenopackets.api_views)

O

options() (chord_metadata_service.patients.api_views.PublicListIndividuals method)

P

pagination_class (chord_metadata_service.experiments.api_views.ExperimentViewSet attribute) (chord_metadata_service.patients.api_views.IndividualBatchViewSet attribute) (chord_metadata_service.patients.api_views.IndividualViewSet attribute) (chord_metadata_service.phenopackets.api_views.BiosampleBatchViewSet attribute) (chord_metadata_service.phenopackets.api_views.PhenopacketsModelViewSet attribute) (chord_metadata_service.resources.api_views.ResourceViewSet attribute) Phenopacket (class in chord_metadata_service.phenopackets.models) Phenopacket.DoesNotExist Phenopacket.MultipleObjectsReturned PhenopacketsModelViewSet (class in chord_metadata_service.phenopackets.api_views) PhenopacketViewSet (class in chord_metadata_service.phenopackets.api_views) PhenotypicFeature (class in chord_metadata_service.phenopackets.models) PhenotypicFeature.DoesNotExist

PhenotypicFeature.MultipleObjectsReturned PhenotypicFeatureViewSet (class in chord_metadata_service.phenopackets.api_views) Procedure (class in chord_metadata_service.phenopackets.models) Procedure.DoesNotExist Procedure.MultipleObjectsReturned ProcedureViewSet (class in chord_metadata_service.phenopackets.api_views) Project (class in chord_metadata_service.chord.models) Project.DoesNotExist Project.MultipleObjectsReturned ProjectJsonSchema (class in chord_metadata_service.chord.models) ProjectJsonSchema.DoesNotExist ProjectJsonSchema.MultipleObjectsReturned PublicListIndividuals (class in chord_metadata_service.patients.api_views)

R

Resource (class in chord_metadata_service.resources.models) Resource.DoesNotExist

Resource.MultipleObjectsReturned ResourceViewSet (class in chord_metadata_service.resources.api_views)

S

save() (chord_metadata_service.chord.models.Dataset method) (chord_metadata_service.chord.models.ProjectJsonSchema method) (chord_metadata_service.resources.models.Resource method) schema_type() (chord_metadata_service.patients.models.Individual property) (chord_metadata_service.phenopackets.models.Biosample property) (chord_metadata_service.phenopackets.models.Phenopacket property) serializer_class (chord_metadata_service.experiments.api_views.ExperimentViewSet attribute) (chord_metadata_service.patients.api_views.IndividualBatchViewSet attribute) (chord_metadata_service.patients.api_views.IndividualViewSet attribute) (chord_metadata_service.phenopackets.api_views.BiosampleBatchViewSet attribute) (chord_metadata_service.phenopackets.api_views.BiosampleViewSet attribute) (chord_metadata_service.phenopackets.api_views.DiagnosisViewSet attribute) (chord_metadata_service.phenopackets.api_views.DiseaseViewSet attribute) (chord_metadata_service.phenopackets.api_views.GeneViewSet attribute) (chord_metadata_service.phenopackets.api_views.GenomicInterpretationViewSet attribute) (chord_metadata_service.phenopackets.api_views.HtsFileViewSet attribute) (chord_metadata_service.phenopackets.api_views.InterpretationViewSet attribute) (chord_metadata_service.phenopackets.api_views.MetaDataViewSet attribute) (chord_metadata_service.phenopackets.api_views.PhenopacketViewSet attribute) (chord_metadata_service.phenopackets.api_views.PhenotypicFeatureViewSet attribute) (chord_metadata_service.phenopackets.api_views.ProcedureViewSet attribute) (chord_metadata_service.phenopackets.api_views.VariantViewSet attribute) (chord_metadata_service.resources.api_views.ResourceViewSet attribute)

V

Variant (class in chord_metadata_service.phenopackets.models) Variant.DoesNotExist

Variant.MultipleObjectsReturned VariantViewSet (class in chord_metadata_service.phenopackets.api_views)